ShrunkCovariance
Covariance estimator with shrinkage.
Read more in the User Guide.
Python Reference (opens in a new tab)
Constructors
constructor()
Signature
new ShrunkCovariance(opts?: object): ShrunkCovariance;Parameters
| Name | Type | Description |
|---|---|---|
opts? | object | - |
opts.assume_centered? | boolean | If true, data will not be centered before computation. Useful when working with data whose mean is almost, but not exactly zero. If false, data will be centered before computation. Default Value false |
opts.shrinkage? | number | Coefficient in the convex combination used for the computation of the shrunk estimate. Range is [0, 1]. Default Value 0.1 |
opts.store_precision? | boolean | Specify if the estimated precision is stored. Default Value true |
Returns
Defined in: generated/covariance/ShrunkCovariance.ts:23 (opens in a new tab)
Methods
dispose()
Disposes of the underlying Python resources.
Once dispose() is called, the instance is no longer usable.
Signature
dispose(): Promise<void>;Returns
Promise<void>
Defined in: generated/covariance/ShrunkCovariance.ts:106 (opens in a new tab)
error_norm()
Compute the Mean Squared Error between two covariance estimators.
Signature
error_norm(opts: object): Promise<number>;Parameters
| Name | Type | Description |
|---|---|---|
opts | object | - |
opts.comp_cov? | ArrayLike[] | The covariance to compare with. |
opts.norm? | "frobenius" | "spectral" | The type of norm used to compute the error. Available error types: - ‘frobenius’ (default): sqrt(tr(A^t.A)) - ‘spectral’: sqrt(max(eigenvalues(A^t.A)) where A is the error (comp\_cov \- self.covariance\_). Default Value 'frobenius' |
opts.scaling? | boolean | If true (default), the squared error norm is divided by n_features. If false, the squared error norm is not rescaled. Default Value true |
opts.squared? | boolean | Whether to compute the squared error norm or the error norm. If true (default), the squared error norm is returned. If false, the error norm is returned. Default Value true |
Returns
Promise<number>
Defined in: generated/covariance/ShrunkCovariance.ts:123 (opens in a new tab)
fit()
Fit the shrunk covariance model to X.
Signature
fit(opts: object): Promise<any>;Parameters
| Name | Type | Description |
|---|---|---|
opts | object | - |
opts.X? | ArrayLike[] | Training data, where n\_samples is the number of samples and n\_features is the number of features. |
opts.y? | any | Not used, present for API consistency by convention. |
Returns
Promise<any>
Defined in: generated/covariance/ShrunkCovariance.ts:183 (opens in a new tab)
get_metadata_routing()
Get metadata routing of this object.
Please check User Guide on how the routing mechanism works.
Signature
get_metadata_routing(opts: object): Promise<any>;Parameters
| Name | Type | Description |
|---|---|---|
opts | object | - |
opts.routing? | any | A MetadataRequest encapsulating routing information. |
Returns
Promise<any>
Defined in: generated/covariance/ShrunkCovariance.ts:225 (opens in a new tab)
get_precision()
Getter for the precision matrix.
Signature
get_precision(opts: object): Promise<any>;Parameters
| Name | Type | Description |
|---|---|---|
opts | object | - |
opts.precision_? | ArrayLike[] | The precision matrix associated to the current covariance object. |
Returns
Promise<any>
Defined in: generated/covariance/ShrunkCovariance.ts:262 (opens in a new tab)
init()
Initializes the underlying Python resources.
This instance is not usable until the Promise returned by init() resolves.
Signature
init(py: PythonBridge): Promise<void>;Parameters
| Name | Type |
|---|---|
py | PythonBridge |
Returns
Promise<void>
Defined in: generated/covariance/ShrunkCovariance.ts:62 (opens in a new tab)
mahalanobis()
Compute the squared Mahalanobis distances of given observations.
Signature
mahalanobis(opts: object): Promise<ArrayLike>;Parameters
| Name | Type | Description |
|---|---|---|
opts | object | - |
opts.X? | ArrayLike[] | The observations, the Mahalanobis distances of the which we compute. Observations are assumed to be drawn from the same distribution than the data used in fit. |
Returns
Promise<ArrayLike>
Defined in: generated/covariance/ShrunkCovariance.ts:300 (opens in a new tab)
score()
Compute the log-likelihood of X\_test under the estimated Gaussian model.
The Gaussian model is defined by its mean and covariance matrix which are represented respectively by self.location\_ and self.covariance\_.
Signature
score(opts: object): Promise<number>;Parameters
| Name | Type | Description |
|---|---|---|
opts | object | - |
opts.X_test? | ArrayLike[] | Test data of which we compute the likelihood, where n\_samples is the number of samples and n\_features is the number of features. X\_test is assumed to be drawn from the same distribution than the data used in fit (including centering). |
opts.y? | any | Not used, present for API consistency by convention. |
Returns
Promise<number>
Defined in: generated/covariance/ShrunkCovariance.ts:337 (opens in a new tab)
set_score_request()
Request metadata passed to the score method.
Note that this method is only relevant if enable\_metadata\_routing=True (see sklearn.set\_config). Please see User Guide on how the routing mechanism works.
The options for each parameter are:
Signature
set_score_request(opts: object): Promise<any>;Parameters
| Name | Type | Description |
|---|---|---|
opts | object | - |
opts.X_test? | string | boolean | Metadata routing for X\_test parameter in score. |
Returns
Promise<any>
Defined in: generated/covariance/ShrunkCovariance.ts:383 (opens in a new tab)
Properties
_isDisposed
boolean=false
Defined in: generated/covariance/ShrunkCovariance.ts:21 (opens in a new tab)
_isInitialized
boolean=false
Defined in: generated/covariance/ShrunkCovariance.ts:20 (opens in a new tab)
_py
PythonBridge
Defined in: generated/covariance/ShrunkCovariance.ts:19 (opens in a new tab)
id
string
Defined in: generated/covariance/ShrunkCovariance.ts:16 (opens in a new tab)
opts
any
Defined in: generated/covariance/ShrunkCovariance.ts:17 (opens in a new tab)
Accessors
covariance_
Estimated covariance matrix
Signature
covariance_(): Promise<ArrayLike[]>;Returns
Promise<ArrayLike[]>
Defined in: generated/covariance/ShrunkCovariance.ts:420 (opens in a new tab)
feature_names_in_
Names of features seen during fit. Defined only when X has feature names that are all strings.
Signature
feature_names_in_(): Promise<ArrayLike>;Returns
Promise<ArrayLike>
Defined in: generated/covariance/ShrunkCovariance.ts:528 (opens in a new tab)
location_
Estimated location, i.e. the estimated mean.
Signature
location_(): Promise<ArrayLike>;Returns
Promise<ArrayLike>
Defined in: generated/covariance/ShrunkCovariance.ts:447 (opens in a new tab)
n_features_in_
Number of features seen during fit.
Signature
n_features_in_(): Promise<number>;Returns
Promise<number>
Defined in: generated/covariance/ShrunkCovariance.ts:501 (opens in a new tab)
precision_
Estimated pseudo inverse matrix. (stored only if store_precision is true)
Signature
precision_(): Promise<ArrayLike[]>;Returns
Promise<ArrayLike[]>
Defined in: generated/covariance/ShrunkCovariance.ts:474 (opens in a new tab)
py
Signature
py(): PythonBridge;Returns
PythonBridge
Defined in: generated/covariance/ShrunkCovariance.ts:49 (opens in a new tab)
Signature
py(pythonBridge: PythonBridge): void;Parameters
| Name | Type |
|---|---|
pythonBridge | PythonBridge |
Returns
void
Defined in: generated/covariance/ShrunkCovariance.ts:53 (opens in a new tab)